Computing metrics to inform selection of candidate areas for a regionalized approach to bovine tuberculosis eradication in Ireland.
DOI:
https://doi.org/10.12834/VetIt.3486.23927.2Keywords:
Regionalization, Metrics, Bovine tubercolosis, Disease eradication, IrelandAbstract
We describe the computation of metrics to inform the selection of areas for a regionalised approach to bovine tuberculosis eradication in Ireland. Our aim was not to recommend suitable regions but to elucidate the criteria used in metric selection and comment on the diversity of metric values amongst regions. The 26 counties of Ireland were compared using 20 metrics, grouped into five categories: region size and cattle population, herd fragmentation, cattle movement, bovine TB testing, badger population and control. Fragmentation metrics, measuring the proportion of herds with land in at least two counties, varied considerably by county, from 1% to 24 %. Between 25 % and 92 % of moves into herds came from a different county, illustrating the likely disruption in trade that a regionalized approach could entail. Cattle movement networks were combined with a risk model to calculate the proportion of moves which would be deemed risky under a risk-based trading regime and these results were compared to a more traditional approach based on the herd type and test history of each herd, with many fewer moves potentially restricted using the latter approach. We show how correlation between region size and some of the metrics complicates their interpretation.References
Allen, A.R., Skuce, R.A., Byrne, A.W., 2018. Bovine Tuberculosis in Britain and Ireland – A Perfect Storm? the Confluence of Potential Ecological and Epidemiological Impediments to Controlling a Chronic Infectious Disease. Frontiers in Veterinary Science 5.
Bezos, J., Sáez-Llorente, J., Álvarez, J., Romero, B., Díez-Guerrier, A., Domínguez, L., de Juan, L., 2023. Bovine tuberculosis in Spain, is it really the final countdown? Irish Veterinary Journal 76.
Bradfield, T., Butler, R., Dillon, E., Hennessey, T., Kilgariff, P., 2021. The Effect of Land Fragmentation on the Technical Inefficiency of Dairy Farms. Journal of agricultural economics 72, 486-499.
Bradfield, T., Butler, R., Dillon, E., Hennessey, T., Kilgarriff, P., 2021. The Effect of Land Fragmentation on the Technical Inefficiency of Dairy Farms. Journal of Agricultural Economics 72, 486–499.
Broughan, J.M., Judge, J., Ely, E., Delahay, R.J., Wilson, G., Clifton-Hadley, R.S., Goodchild, A.V., Bishop, H., Parry, J.E., Downs, S.H., 2016. A review of risk factors for bovine tuberculosis infection in cattle in the UK and Ireland. Epidemiology and infection 144, 2899–2926.
Byrne, A.W., Acevedo, P., Green, S., O'Keeffe, J., 2014. Estimating badger social-group abundance in the Republic of Ireland using cross-validated species distribution modelling. Ecological Indicators 43, 94-102.
Byrne, A.W., Kenny, K., Fogarty, U., O'Keefe, J.J., More, S.J., McGrath, G., Teeling, M., Martin, S.W., Dohoo, I.R., 2015. Spatial and temporal analyses of metrics of tuberculosis infection in badgers (Meles meles) from the Republic of Ireland: Trends in apparent prevalence. Preventive Veterinary Medicine 122, 345–354.
Department of Agriculture, Food and the Marine, 2024. Cattle (AIM). https://www.gov.ie/en/publication/467e3-cattle-aim/.
Fielding, H.R., McKinley, T.J., Delahay, R.J., Silk, M.J., McDonald, R.A., 2019. Effects of trading networks on the risk of bovine tuberculosis incidents on cattle farms in Great Britain. Royal Society Open Science 7.
Grear, D.A., Kaneene, J.B., Averill, J.J., WEBB, C.T., 2014. Local cattle movements in response to ongoing bovine tuberculosis zonation and regulations in Michigan, USA. Preventive Veterinary Medicine 114, 201–212.
Griffin, J.M., Breslin, P., Good, M., Gordon, S.V., Gormley, E., Menzies, F.D., More, S.J., Ring, S., Wiseman, J., 2023. Can a regional approach be applied to achieve eradication of bovine tuberculosis in Ireland? Food Risk Assess Europe. https://assets.gov.ie/276278/71b9c759-aa6f-49d0-a5c1-0b695889b527.pdf.
Griffin JM, Williams DH, Kelly GE, Clegg TA, O’Boyle I, Collins JD, More, S.J (2005). The impact of badger removal on the control of tuberculosis in cattle herds in Ireland. Preventive Veterinary Medicine. 67(4):237-66. https://doi.org/10.1016/j.prevetmed.2004.10.009.
World Organisation for Animal Health, 2023. Terrestrial Animal Health Code, chapter 4.4. Zoning and Compartmentalisation. https://www.woah.org/en/what-we-do/standards/codes-and-manuals/terrestrial-code-online-access/.
Hidano, A., Carpenter, T.E., Stevenson, M.A., Gates, M.C., 2016. Evaluating the efficacy of regionalization in limiting high-risk livestock trade movements. Prev Vet Med 133, 31–41. Preventive Veterinary Medicine 133, 31-41.
Livingstone, P.G., Ryan, T.J., Hancox, N.G., Crews, K.B., Bosson, M.A.J., Knowles, G., McCook, W., 2006. Regionalization: A strategy that will assist with bovine tuberculosis control and facilitate trade. Veterinary Microbiology 112, 291-301.
McGrath, G., Tratalos, J.A., More, S.J., 2018. A visual representation of cattle movement in Ireland during 2016. Irish Veterinary Journal 71.
Milne, G., Graham, J., McGrath, J., Kirke, R., McMaster, W., Byrne, A.W., 2022. Investigating Farm Fragmentation as a Risk Factor for Bovine Tuberculosis in Cattle Herds: A Matched Case-Control Study from Northern Ireland. Pathogens 11.
More, S.J., 2019. Can bovine TB be eradicated from the Republic of Ireland? Could this be achieved by 2030? Irish Veterinary Journal 72.
More, S.J., Good, M., 2015. Understanding and managing bTB risk: perspectives from Ireland. Veterinary Microbiology 176, 209-218.
More, S.J., 2023. bTB eradication in Ireland: where to from here? Ir. Vet. J. 76, 11. Irish Veterinary Journal 76.
More, S.J., Radunz, B., Glanville, R.J., 2015. Lessons learned during the successful eradication of bovine tuberculosis from Australia. Veterinary Record 177, 224-232.
Ryan, E., Breslin, P., O'Keefe, J.J., Byrne, A.W., Wrigley, K., Barrett, D., 2023. The Irish bTB eradication programme: combining stakeholder engagement and research-driven policy to tackle bovine tuberculosis. Irish Veterinary Journal 76 (Suppl 1).
Sheridan, M., Good, M., More, S.J., Gormley, E., 2014. The impact of an integrated wildlife and bovine tuberculosis eradication program in Ireland. In: Thoen, C.O., Steele, J.H. (Eds.), Zoonotic Tuberculosis: Mycobacterium Bovis and Other Pathogenic Mycobacteria. . Wiley-Blackwell, Iowa, USA, 323–340.
Tratalos, J., A., Fielding, H., R., Madden, J., M., Casey, M., More, S., J., 2023. Can Ingoing Contact Chains and other cattle movement network metrics help predict herd-level bovine tuberculosis in Irish cattle herds? Preventive Veterinary Medicine 211, 105816.
Tratalos, J.A., Madden, J.M., McGrath, G., Graham, D.A., Collins, Á.B., More, S.J., 2020. Spatial and network characteristics of Irish cattle movements. Prev Vet Med 183.
World Organisation for Animal Health (OIE) (2023). – Terrestrial Animal Health Code, 31st Ed. OIE, Paris, France. Available at: https://www.woah.org/en/what-we-do/standards/codes-and-manuals/terrestrial-code-online-access/ (accessed on 22nd May 2024).
Zimmermann, J., Lydon, K., Packham, I., Smith, G., Green, S., 2016. The Irish Land-Parcels Identification System (LPIS)–Experiences in ongoing and recent environmental research and land cover mapping. Biology and Environment: Proceedings of the Royal Irish Academy 116B, 53-62.